Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
TCRAP04437 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 AC084018.2-201ENST00000613093 2607 ntBASIC13.87□□□□□ -0.19
TCRAP04437 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.87□□□□□ -0.19
TCRAP04437 NIFKP9-201ENST00000419265 221 ntBASIC13.87□□□□□ -0.19
TCRAP04437 KRT17P3-201ENST00000420566 1262 ntBASIC13.87□□□□□ -0.19
TCRAP04437 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.87□□□□□ -0.19
TCRAP04437 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.87□□□□□ -0.19
TCRAP04437 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRAP04437 AC069544.1-201ENST00000609399 999 ntBASIC13.87□□□□□ -0.19
TCRAP04437 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
TCRAP04437 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TCRAP04437 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TCRAP04437 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TCRAP04437 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRAP04437 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRAP04437 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TCRAP04437 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TCRAP04437 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.87□□□□□ -0.19
TCRAP04437 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRAP04437 AC034236.2-201ENST00000606662 1610 ntBASIC13.86□□□□□ -0.19
TCRAP04437 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TCRAP04437 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TCRAP04437 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TCRAP04437 KRASP1-201ENST00000407852 552 ntBASIC13.86□□□□□ -0.19
TCRAP04437 AC239809.2-201ENST00000415381 517 ntBASIC13.86□□□□□ -0.19
TCRAP04437 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRAP04437 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRAP04437 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.86□□□□□ -0.19
TCRAP04437 AC008403.3-201ENST00000598924 454 ntBASIC13.86□□□□□ -0.19
TCRAP04437 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 KRT8P50-201ENST00000562022 1438 ntBASIC13.86□□□□□ -0.19
TCRAP04437 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRAP04437 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TCRAP04437 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRAP04437 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TCRAP04437 AC124067.4-201ENST00000519691 2379 ntBASIC13.86□□□□□ -0.19
TCRAP04437 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRAP04437 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRAP04437 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TCRAP04437 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TCRAP04437 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRAP04437 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRAP04437 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRAP04437 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TCRAP04437 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.85□□□□□ -0.19
TCRAP04437 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TCRAP04437 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRAP04437 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.85□□□□□ -0.19
TCRAP04437 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.85□□□□□ -0.19
TCRAP04437 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TCRAP04437 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms