Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-CO1P00395 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-CO1P00395 Z83836.1-201ENST00000624605 1642 ntBASIC18.63■□□□□ 0.57
MT-CO1P00395 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MT-CO1P00395 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MT-CO1P00395 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-CO1P00395 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-CO1P00395 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.63■□□□□ 0.57
MT-CO1P00395 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 TSPY22P-201ENST00000427496 604 ntBASIC18.63■□□□□ 0.57
MT-CO1P00395 KRT18P48-201ENST00000434763 852 ntBASIC18.63■□□□□ 0.57
MT-CO1P00395 AP003733.1-201ENST00000491725 852 ntBASIC18.63■□□□□ 0.57
MT-CO1P00395 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.63■□□□□ 0.57
MT-CO1P00395 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-CO1P00395 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MT-CO1P00395 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.63■□□□□ 0.57
MT-CO1P00395 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 WIZP1-201ENST00000531444 2299 ntBASIC18.63■□□□□ 0.57
MT-CO1P00395 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-CO1P00395 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO1P00395 AC026471.1-201ENST00000564629 3026 ntBASIC18.63■□□□□ 0.57
MT-CO1P00395 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
MT-CO1P00395 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
MT-CO1P00395 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MT-CO1P00395 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
MT-CO1P00395 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-CO1P00395 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.62■□□□□ 0.57
MT-CO1P00395 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-CO1P00395 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.62■□□□□ 0.57
MT-CO1P00395 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.62■□□□□ 0.57
MT-CO1P00395 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MT-CO1P00395 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-CO1P00395 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-CO1P00395 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.62■□□□□ 0.57
MT-CO1P00395 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-CO1P00395 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO1P00395 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MT-CO1P00395 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MT-CO1P00395 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 AL024508.2-201ENST00000607749 1894 ntBASIC18.61■□□□□ 0.57
MT-CO1P00395 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MT-CO1P00395 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MT-CO1P00395 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MT-CO1P00395 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.61■□□□□ 0.57
MT-CO1P00395 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.61■□□□□ 0.57
MT-CO1P00395 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 BX276092.5-203ENST00000456199 560 ntBASIC18.61■□□□□ 0.57
MT-CO1P00395 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.61■□□□□ 0.57
MT-CO1P00395 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 NPAP1P7-201ENST00000613027 823 ntBASIC18.61■□□□□ 0.57
MT-CO1P00395 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.61■□□□□ 0.57
MT-CO1P00395 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.61■□□□□ 0.57
MT-CO1P00395 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO1P00395 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
MT-CO1P00395 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms