Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLPTM1O96005 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLPTM1O96005 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPTM1O96005 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLPTM1O96005 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPTM1O96005 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLPTM1O96005 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLPTM1O96005 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CLPTM1O96005 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLPTM1O96005 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLPTM1O96005 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPTM1O96005 AC023632.3-201ENST00000521633 145 ntBASIC17.19■□□□□ 0.34
CLPTM1O96005 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.19■□□□□ 0.34
CLPTM1O96005 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLPTM1O96005 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.19■□□□□ 0.34
CLPTM1O96005 FLJ13224-201ENST00000313737 1514 ntBASIC17.19■□□□□ 0.34
CLPTM1O96005 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPTM1O96005 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.19■□□□□ 0.34
CLPTM1O96005 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.19■□□□□ 0.34
CLPTM1O96005 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLPTM1O96005 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.19■□□□□ 0.34
CLPTM1O96005 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPTM1O96005 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPTM1O96005 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLPTM1O96005 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.18■□□□□ 0.34
CLPTM1O96005 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.18■□□□□ 0.34
CLPTM1O96005 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CLPTM1O96005 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLPTM1O96005 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.18■□□□□ 0.34
CLPTM1O96005 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLPTM1O96005 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLPTM1O96005 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CLPTM1O96005 AC006058.3-201ENST00000606217 1069 ntBASIC17.18■□□□□ 0.34
CLPTM1O96005 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CLPTM1O96005 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.18■□□□□ 0.34
CLPTM1O96005 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.18■□□□□ 0.34
CLPTM1O96005 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.18■□□□□ 0.34
CLPTM1O96005 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPTM1O96005 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLPTM1O96005 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.17■□□□□ 0.34
CLPTM1O96005 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLPTM1O96005 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.17■□□□□ 0.34
CLPTM1O96005 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.17■□□□□ 0.34
CLPTM1O96005 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms