Protein–RNA interactions for Protein: O95409

ZIC2, Zinc finger protein ZIC 2, humanhuman

Predicted RBP Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC2O95409 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.31■□□□□ 0.36
ZIC2O95409 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.31■□□□□ 0.36
ZIC2O95409 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.31■□□□□ 0.36
ZIC2O95409 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.31■□□□□ 0.36
ZIC2O95409 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.31■□□□□ 0.36
ZIC2O95409 AC011498.5-201ENST00000592027 486 ntBASIC17.31■□□□□ 0.36
ZIC2O95409 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.31■□□□□ 0.36
ZIC2O95409 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZIC2O95409 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
ZIC2O95409 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
ZIC2O95409 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZIC2O95409 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
ZIC2O95409 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZIC2O95409 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZIC2O95409 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZIC2O95409 GPAT2P1-201ENST00000444924 1672 ntBASIC17.3■□□□□ 0.36
ZIC2O95409 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.3■□□□□ 0.36
ZIC2O95409 STARP1-201ENST00000397973 869 ntBASIC17.3■□□□□ 0.36
ZIC2O95409 RNA5SP419-201ENST00000515908 135 ntBASIC17.3■□□□□ 0.36
ZIC2O95409 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.3■□□□□ 0.36
ZIC2O95409 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ZIC2O95409 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.3■□□□□ 0.36
ZIC2O95409 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZIC2O95409 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
ZIC2O95409 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.3■□□□□ 0.36
ZIC2O95409 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC2O95409 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZIC2O95409 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.3■□□□□ 0.36
ZIC2O95409 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.29■□□□□ 0.36
ZIC2O95409 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC2O95409 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZIC2O95409 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.29■□□□□ 0.36
ZIC2O95409 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.29■□□□□ 0.36
ZIC2O95409 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 AL023284.2-201ENST00000405850 579 ntBASIC17.29■□□□□ 0.36
ZIC2O95409 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC2O95409 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.29■□□□□ 0.36
ZIC2O95409 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC2O95409 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.29■□□□□ 0.36
ZIC2O95409 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.29■□□□□ 0.36
ZIC2O95409 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZIC2O95409 MIR4674-201ENST00000582457 87 ntBASIC17.29■□□□□ 0.36
ZIC2O95409 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.29■□□□□ 0.36
ZIC2O95409 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.29■□□□□ 0.36
ZIC2O95409 AL023803.3-201ENST00000615559 522 ntBASIC17.29■□□□□ 0.36
ZIC2O95409 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 AL109659.2-201ENST00000606809 1674 ntBASIC17.29■□□□□ 0.36
ZIC2O95409 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZIC2O95409 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC2O95409 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC2O95409 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZIC2O95409 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.28■□□□□ 0.36
ZIC2O95409 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC2O95409 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC2O95409 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC2O95409 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZIC2O95409 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ZIC2O95409 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZIC2O95409 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.28■□□□□ 0.36
ZIC2O95409 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZIC2O95409 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC2O95409 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC2O95409 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
ZIC2O95409 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC2O95409 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZIC2O95409 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC2O95409 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC2O95409 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC2O95409 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms