Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.79■□□□□ 0.28
NKX2-2O95096 HBZP1-201ENST00000354915 429 ntBASIC16.79■□□□□ 0.28
NKX2-2O95096 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 TMPOP1-202ENST00000424642 1267 ntBASIC16.79■□□□□ 0.28
NKX2-2O95096 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.79■□□□□ 0.28
NKX2-2O95096 AC092647.4-201ENST00000457211 535 ntBASIC16.79■□□□□ 0.28
NKX2-2O95096 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.79■□□□□ 0.28
NKX2-2O95096 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.79■□□□□ 0.28
NKX2-2O95096 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.79■□□□□ 0.28
NKX2-2O95096 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.79■□□□□ 0.28
NKX2-2O95096 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.79■□□□□ 0.28
NKX2-2O95096 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.79■□□□□ 0.28
NKX2-2O95096 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.79■□□□□ 0.28
NKX2-2O95096 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.79■□□□□ 0.28
NKX2-2O95096 HYMAI.1-201ENST00000620949 238 ntBASIC16.79■□□□□ 0.28
NKX2-2O95096 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.79■□□□□ 0.28
NKX2-2O95096 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NKX2-2O95096 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NKX2-2O95096 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
NKX2-2O95096 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NKX2-2O95096 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX2-2O95096 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX2-2O95096 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.78■□□□□ 0.28
NKX2-2O95096 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.78■□□□□ 0.28
NKX2-2O95096 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX2-2O95096 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NKX2-2O95096 KRT18P48-201ENST00000434763 852 ntBASIC16.78■□□□□ 0.28
NKX2-2O95096 AC112907.2-201ENST00000448639 330 ntBASIC16.78■□□□□ 0.28
NKX2-2O95096 DUX4L26-201ENST00000489078 1255 ntBASIC16.78■□□□□ 0.28
NKX2-2O95096 AC022616.7-201ENST00000525383 220 ntBASIC16.78■□□□□ 0.28
NKX2-2O95096 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX2-2O95096 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX2-2O95096 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NKX2-2O95096 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.78■□□□□ 0.28
NKX2-2O95096 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.78■□□□□ 0.28
NKX2-2O95096 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NKX2-2O95096 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
NKX2-2O95096 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX2-2O95096 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NKX2-2O95096 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.78■□□□□ 0.28
NKX2-2O95096 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX2-2O95096 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NKX2-2O95096 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX2-2O95096 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NKX2-2O95096 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NKX2-2O95096 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 AC018470.1-201ENST00000624790 3129 ntBASIC16.77■□□□□ 0.28
NKX2-2O95096 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.77■□□□□ 0.28
NKX2-2O95096 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NKX2-2O95096 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX2-2O95096 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NKX2-2O95096 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX2-2O95096 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX2-2O95096 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NKX2-2O95096 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX2-2O95096 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX2-2O95096 MIR662-201ENST00000384847 95 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms