Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
BEST1O76090 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BEST1O76090 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.06■□□□□ 0.64
BEST1O76090 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.06■□□□□ 0.64
BEST1O76090 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
BEST1O76090 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.06■□□□□ 0.64
BEST1O76090 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BEST1O76090 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BEST1O76090 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BEST1O76090 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BEST1O76090 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BEST1O76090 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
BEST1O76090 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.06■□□□□ 0.64
BEST1O76090 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.06■□□□□ 0.64
BEST1O76090 AC233702.3-201ENST00000578656 1387 ntBASIC19.06■□□□□ 0.64
BEST1O76090 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
BEST1O76090 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
BEST1O76090 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.05■□□□□ 0.64
BEST1O76090 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.05■□□□□ 0.64
BEST1O76090 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.05■□□□□ 0.64
BEST1O76090 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.05■□□□□ 0.64
BEST1O76090 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.05■□□□□ 0.64
BEST1O76090 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.05■□□□□ 0.64
BEST1O76090 CLEC4GP1-201ENST00000596555 870 ntBASIC19.05■□□□□ 0.64
BEST1O76090 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
BEST1O76090 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.05■□□□□ 0.64
BEST1O76090 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.05■□□□□ 0.64
BEST1O76090 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
BEST1O76090 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BEST1O76090 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
BEST1O76090 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
BEST1O76090 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.05■□□□□ 0.64
BEST1O76090 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
BEST1O76090 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.04■□□□□ 0.64
BEST1O76090 REXO1L9P-201ENST00000604264 2108 ntBASIC19.04■□□□□ 0.64
BEST1O76090 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.04■□□□□ 0.64
BEST1O76090 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.04■□□□□ 0.64
BEST1O76090 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.04■□□□□ 0.64
BEST1O76090 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST1O76090 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST1O76090 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
BEST1O76090 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.04■□□□□ 0.64
BEST1O76090 AP000867.3-201ENST00000524675 377 ntBASIC19.04■□□□□ 0.64
BEST1O76090 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST1O76090 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BEST1O76090 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 AC009154.2-201ENST00000621177 724 ntBASIC19.04■□□□□ 0.64
BEST1O76090 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST1O76090 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST1O76090 NEFHP1-201ENST00000412845 2629 ntBASIC19.04■□□□□ 0.64
BEST1O76090 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
BEST1O76090 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BEST1O76090 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 BICD1-207ENST00000551848 1962 ntBASIC19.03■□□□□ 0.64
BEST1O76090 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
BEST1O76090 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST1O76090 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
BEST1O76090 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.03■□□□□ 0.64
BEST1O76090 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.03■□□□□ 0.64
BEST1O76090 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.03■□□□□ 0.64
BEST1O76090 AL353801.3-201ENST00000609898 542 ntBASIC19.03■□□□□ 0.64
BEST1O76090 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.03■□□□□ 0.64
BEST1O76090 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST1O76090 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms