Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.81■■□□□ 1.24
CACNA1FO60840 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
CACNA1FO60840 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
CACNA1FO60840 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.81■■□□□ 1.24
CACNA1FO60840 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.81■■□□□ 1.24
CACNA1FO60840 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CACNA1FO60840 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CACNA1FO60840 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
CACNA1FO60840 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
CACNA1FO60840 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CACNA1FO60840 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1FO60840 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.8■■□□□ 1.24
CACNA1FO60840 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.8■■□□□ 1.24
CACNA1FO60840 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
CACNA1FO60840 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.8■■□□□ 1.24
CACNA1FO60840 AC096582.2-201ENST00000510860 516 ntBASIC22.8■■□□□ 1.24
CACNA1FO60840 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.8■■□□□ 1.24
CACNA1FO60840 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.8■■□□□ 1.24
CACNA1FO60840 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.8■■□□□ 1.24
CACNA1FO60840 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1FO60840 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.8■■□□□ 1.24
CACNA1FO60840 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1FO60840 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
CACNA1FO60840 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1FO60840 ADM-208ENST00000534464 1640 ntTSL 2 BASIC22.8■■□□□ 1.24
CACNA1FO60840 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1FO60840 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CACNA1FO60840 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC22.8■■□□□ 1.24
CACNA1FO60840 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CACNA1FO60840 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.8■■□□□ 1.24
CACNA1FO60840 IPPK-202ENST00000375522 882 ntTSL 3 BASIC22.8■■□□□ 1.24
CACNA1FO60840 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.8■■□□□ 1.24
CACNA1FO60840 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
CACNA1FO60840 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.79■■□□□ 1.24
CACNA1FO60840 AC125634.1-201ENST00000438758 1403 ntBASIC22.79■■□□□ 1.24
CACNA1FO60840 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.79■■□□□ 1.24
CACNA1FO60840 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
CACNA1FO60840 REXO1L9P-201ENST00000604264 2108 ntBASIC22.79■■□□□ 1.24
CACNA1FO60840 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
CACNA1FO60840 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
CACNA1FO60840 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.79■■□□□ 1.24
CACNA1FO60840 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.79■■□□□ 1.24
CACNA1FO60840 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.79■■□□□ 1.24
CACNA1FO60840 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 KRT8P10-201ENST00000450021 1447 ntBASIC22.79■■□□□ 1.24
CACNA1FO60840 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CACNA1FO60840 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CACNA1FO60840 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CACNA1FO60840 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CACNA1FO60840 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CACNA1FO60840 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CACNA1FO60840 BX276092.7-203ENST00000637198 1536 ntBASIC22.78■■□□□ 1.24
CACNA1FO60840 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
CACNA1FO60840 KRT18P31-201ENST00000506277 1292 ntBASIC22.78■■□□□ 1.24
CACNA1FO60840 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CACNA1FO60840 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CACNA1FO60840 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
CACNA1FO60840 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.78■■□□□ 1.24
CACNA1FO60840 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.78■■□□□ 1.24
CACNA1FO60840 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.78■■□□□ 1.24
CACNA1FO60840 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CACNA1FO60840 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.78■■□□□ 1.24
CACNA1FO60840 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.78■■□□□ 1.24
CACNA1FO60840 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.78■■□□□ 1.24
CACNA1FO60840 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
CACNA1FO60840 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.78■■□□□ 1.24
CACNA1FO60840 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
CACNA1FO60840 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CACNA1FO60840 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CACNA1FO60840 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.77■■□□□ 1.24
CACNA1FO60840 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CACNA1FO60840 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CACNA1FO60840 NUS1P2-201ENST00000417358 873 ntBASIC22.77■■□□□ 1.24
CACNA1FO60840 AC079781.3-201ENST00000449110 356 ntBASIC22.77■■□□□ 1.24
CACNA1FO60840 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.77■■□□□ 1.24
CACNA1FO60840 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.77■■□□□ 1.24
CACNA1FO60840 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.77■■□□□ 1.24
CACNA1FO60840 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CACNA1FO60840 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.77■■□□□ 1.24
CACNA1FO60840 REXO1L6P-202ENST00000619970 1078 ntBASIC22.77■■□□□ 1.24
CACNA1FO60840 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CACNA1FO60840 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CACNA1FO60840 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CACNA1FO60840 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms