Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDH7O60245 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.39■□□□□ 0.38
PCDH7O60245 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDH7O60245 AL024508.2-201ENST00000607749 1894 ntBASIC17.39■□□□□ 0.38
PCDH7O60245 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
PCDH7O60245 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH7O60245 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH7O60245 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH7O60245 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH7O60245 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 ECEL1P3-201ENST00000427961 737 ntBASIC17.39■□□□□ 0.37
PCDH7O60245 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH7O60245 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDH7O60245 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH7O60245 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH7O60245 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
PCDH7O60245 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH7O60245 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH7O60245 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDH7O60245 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH7O60245 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH7O60245 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDH7O60245 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH7O60245 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH7O60245 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH7O60245 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 AC087499.1-201ENST00000418141 1075 ntBASIC17.38■□□□□ 0.37
PCDH7O60245 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH7O60245 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDH7O60245 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDH7O60245 AC092865.7-201ENST00000641832 219 ntBASIC17.38■□□□□ 0.37
PCDH7O60245 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 AC093010.1-201ENST00000473625 1624 ntBASIC17.38■□□□□ 0.37
PCDH7O60245 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH7O60245 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH7O60245 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH7O60245 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PCDH7O60245 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
PCDH7O60245 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDH7O60245 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH7O60245 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
PCDH7O60245 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH7O60245 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PCDH7O60245 AP000523.1-201ENST00000398242 1049 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms