Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.81■□□□□ 0.44
VEGFDO43915 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.81■□□□□ 0.44
VEGFDO43915 MIR3180-1-201ENST00000580374 94 ntBASIC17.81■□□□□ 0.44
VEGFDO43915 MIR3180-3-201ENST00000584616 94 ntBASIC17.81■□□□□ 0.44
VEGFDO43915 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.81■□□□□ 0.44
VEGFDO43915 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.81■□□□□ 0.44
VEGFDO43915 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.81■□□□□ 0.44
VEGFDO43915 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VEGFDO43915 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VEGFDO43915 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.81■□□□□ 0.44
VEGFDO43915 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.81■□□□□ 0.44
VEGFDO43915 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.81■□□□□ 0.44
VEGFDO43915 AC009113.1-201ENST00000570267 2443 ntBASIC17.81■□□□□ 0.44
VEGFDO43915 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VEGFDO43915 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VEGFDO43915 AL096828.2-201ENST00000567259 1965 ntBASIC17.8■□□□□ 0.44
VEGFDO43915 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
VEGFDO43915 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VEGFDO43915 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.8■□□□□ 0.44
VEGFDO43915 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VEGFDO43915 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
VEGFDO43915 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 HCG4P8-203ENST00000443049 980 ntBASIC17.8■□□□□ 0.44
VEGFDO43915 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 TPSP2-201ENST00000561760 610 ntBASIC17.8■□□□□ 0.44
VEGFDO43915 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 AC011840.4-201ENST00000578471 627 ntBASIC17.8■□□□□ 0.44
VEGFDO43915 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 AC092119.3-201ENST00000612618 583 ntBASIC17.8■□□□□ 0.44
VEGFDO43915 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 AC132938.6-201ENST00000623828 1655 ntBASIC17.8■□□□□ 0.44
VEGFDO43915 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VEGFDO43915 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.8■□□□□ 0.44
VEGFDO43915 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.8■□□□□ 0.44
VEGFDO43915 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.8■□□□□ 0.44
VEGFDO43915 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VEGFDO43915 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VEGFDO43915 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.79■□□□□ 0.44
VEGFDO43915 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
VEGFDO43915 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VEGFDO43915 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VEGFDO43915 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
VEGFDO43915 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.79■□□□□ 0.44
VEGFDO43915 AC246785.2-201ENST00000432512 513 ntBASIC17.79■□□□□ 0.44
VEGFDO43915 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.79■□□□□ 0.44
VEGFDO43915 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.79■□□□□ 0.44
VEGFDO43915 AC068472.1-201ENST00000474589 881 ntBASIC17.79■□□□□ 0.44
VEGFDO43915 VENTXP7-201ENST00000475503 772 ntBASIC17.79■□□□□ 0.44
VEGFDO43915 DUTP2-201ENST00000519164 463 ntBASIC17.79■□□□□ 0.44
VEGFDO43915 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.79■□□□□ 0.44
VEGFDO43915 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.79■□□□□ 0.44
VEGFDO43915 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.79■□□□□ 0.44
VEGFDO43915 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.79■□□□□ 0.44
VEGFDO43915 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VEGFDO43915 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.79■□□□□ 0.44
VEGFDO43915 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VEGFDO43915 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VEGFDO43915 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.78■□□□□ 0.44
VEGFDO43915 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
VEGFDO43915 AC022898.2-201ENST00000616822 1312 ntBASIC17.78■□□□□ 0.44
VEGFDO43915 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VEGFDO43915 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VEGFDO43915 HCG11-201ENST00000411553 5696 ntBASIC17.78■□□□□ 0.44
VEGFDO43915 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms