Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EXTL3O43909 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EXTL3O43909 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EXTL3O43909 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EXTL3O43909 TSPY22P-201ENST00000427496 604 ntBASIC19.71■□□□□ 0.75
EXTL3O43909 KRT18P56-201ENST00000507275 550 ntBASIC19.71■□□□□ 0.75
EXTL3O43909 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EXTL3O43909 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.71■□□□□ 0.75
EXTL3O43909 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.71■□□□□ 0.75
EXTL3O43909 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.71■□□□□ 0.75
EXTL3O43909 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.71■□□□□ 0.75
EXTL3O43909 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.71■□□□□ 0.75
EXTL3O43909 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EXTL3O43909 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EXTL3O43909 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EXTL3O43909 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.71■□□□□ 0.75
EXTL3O43909 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EXTL3O43909 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.7■□□□□ 0.74
EXTL3O43909 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.7■□□□□ 0.74
EXTL3O43909 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
EXTL3O43909 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.7■□□□□ 0.74
EXTL3O43909 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
EXTL3O43909 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.7■□□□□ 0.74
EXTL3O43909 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.7■□□□□ 0.74
EXTL3O43909 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.7■□□□□ 0.74
EXTL3O43909 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.7■□□□□ 0.74
EXTL3O43909 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.7■□□□□ 0.74
EXTL3O43909 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.7■□□□□ 0.74
EXTL3O43909 AL121894.2-201ENST00000602977 491 ntBASIC19.7■□□□□ 0.74
EXTL3O43909 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
EXTL3O43909 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.7■□□□□ 0.74
EXTL3O43909 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.7■□□□□ 0.74
EXTL3O43909 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXTL3O43909 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
EXTL3O43909 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
EXTL3O43909 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
EXTL3O43909 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXTL3O43909 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXTL3O43909 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXTL3O43909 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXTL3O43909 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.69■□□□□ 0.74
EXTL3O43909 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.69■□□□□ 0.74
EXTL3O43909 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
EXTL3O43909 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
EXTL3O43909 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
EXTL3O43909 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
EXTL3O43909 KRT8P26-201ENST00000534154 1276 ntBASIC19.69■□□□□ 0.74
EXTL3O43909 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.69■□□□□ 0.74
EXTL3O43909 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.69■□□□□ 0.74
EXTL3O43909 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.69■□□□□ 0.74
EXTL3O43909 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
EXTL3O43909 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.69■□□□□ 0.74
EXTL3O43909 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXTL3O43909 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXTL3O43909 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXTL3O43909 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
EXTL3O43909 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXTL3O43909 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EXTL3O43909 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
EXTL3O43909 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.68■□□□□ 0.74
EXTL3O43909 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
EXTL3O43909 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.68■□□□□ 0.74
EXTL3O43909 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EXTL3O43909 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.68■□□□□ 0.74
EXTL3O43909 TSPY12P-201ENST00000421279 868 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms