Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDELR3O43731 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
KDELR3O43731 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.42■□□□□ 0.54
KDELR3O43731 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.42■□□□□ 0.54
KDELR3O43731 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.42■□□□□ 0.54
KDELR3O43731 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
KDELR3O43731 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
KDELR3O43731 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.42■□□□□ 0.54
KDELR3O43731 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
KDELR3O43731 AC068472.1-201ENST00000474589 881 ntBASIC18.42■□□□□ 0.54
KDELR3O43731 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.42■□□□□ 0.54
KDELR3O43731 DUTP2-201ENST00000519164 463 ntBASIC18.42■□□□□ 0.54
KDELR3O43731 AC124864.1-201ENST00000623408 392 ntBASIC18.42■□□□□ 0.54
KDELR3O43731 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDELR3O43731 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
KDELR3O43731 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.41■□□□□ 0.54
KDELR3O43731 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
KDELR3O43731 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.41■□□□□ 0.54
KDELR3O43731 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.41■□□□□ 0.54
KDELR3O43731 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.41■□□□□ 0.54
KDELR3O43731 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
KDELR3O43731 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 AL592071.1-201ENST00000611956 408 ntBASIC18.41■□□□□ 0.54
KDELR3O43731 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 KRT18P1-202ENST00000452408 1331 ntBASIC18.41■□□□□ 0.54
KDELR3O43731 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
KDELR3O43731 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDELR3O43731 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.4■□□□□ 0.54
KDELR3O43731 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.4■□□□□ 0.54
KDELR3O43731 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
KDELR3O43731 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.4■□□□□ 0.54
KDELR3O43731 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 MIR3180-1-201ENST00000580374 94 ntBASIC18.4■□□□□ 0.54
KDELR3O43731 MIR3180-3-201ENST00000584616 94 ntBASIC18.4■□□□□ 0.54
KDELR3O43731 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
KDELR3O43731 AP002414.4-201ENST00000589764 1148 ntBASIC18.4■□□□□ 0.54
KDELR3O43731 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.4■□□□□ 0.54
KDELR3O43731 ABALON-201ENST00000629058 1903 ntBASIC18.4■□□□□ 0.54
KDELR3O43731 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.4■□□□□ 0.54
KDELR3O43731 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 REXO1L9P-201ENST00000604264 2108 ntBASIC18.4■□□□□ 0.54
KDELR3O43731 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.4■□□□□ 0.54
KDELR3O43731 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KDELR3O43731 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
KDELR3O43731 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
KDELR3O43731 AC135050.7-201ENST00000624508 2218 ntBASIC18.39■□□□□ 0.54
KDELR3O43731 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KDELR3O43731 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms