Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LDB2O43679 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
LDB2O43679 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LDB2O43679 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LDB2O43679 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.19■□□□□ 0.5
LDB2O43679 AC063952.2-201ENST00000498792 1227 ntBASIC18.19■□□□□ 0.5
LDB2O43679 LINC00167-201ENST00000530583 1419 ntBASIC18.19■□□□□ 0.5
LDB2O43679 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.19■□□□□ 0.5
LDB2O43679 AL049597.2-201ENST00000565575 961 ntBASIC18.19■□□□□ 0.5
LDB2O43679 AC008687.5-201ENST00000593746 558 ntBASIC18.19■□□□□ 0.5
LDB2O43679 HYMAI.1-201ENST00000620949 238 ntBASIC18.19■□□□□ 0.5
LDB2O43679 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LDB2O43679 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.19■□□□□ 0.5
LDB2O43679 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.19■□□□□ 0.5
LDB2O43679 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LDB2O43679 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LDB2O43679 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
LDB2O43679 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LDB2O43679 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.18■□□□□ 0.5
LDB2O43679 AL359075.1-203ENST00000462729 1002 ntBASIC18.18■□□□□ 0.5
LDB2O43679 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 AC113404.2-201ENST00000507884 177 ntBASIC18.18■□□□□ 0.5
LDB2O43679 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.18■□□□□ 0.5
LDB2O43679 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.18■□□□□ 0.5
LDB2O43679 AC024563.2-201ENST00000603282 481 ntBASIC18.18■□□□□ 0.5
LDB2O43679 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LDB2O43679 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LDB2O43679 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.18■□□□□ 0.5
LDB2O43679 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 KRT89P-201ENST00000620027 1478 ntBASIC18.18■□□□□ 0.5
LDB2O43679 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.18■□□□□ 0.5
LDB2O43679 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LDB2O43679 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.18■□□□□ 0.5
LDB2O43679 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LDB2O43679 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LDB2O43679 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.17■□□□□ 0.5
LDB2O43679 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.17■□□□□ 0.5
LDB2O43679 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 HBZP1-201ENST00000354915 429 ntBASIC18.17■□□□□ 0.5
LDB2O43679 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.17■□□□□ 0.5
LDB2O43679 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.17■□□□□ 0.5
LDB2O43679 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.17■□□□□ 0.5
LDB2O43679 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LDB2O43679 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.17■□□□□ 0.5
LDB2O43679 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LDB2O43679 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LDB2O43679 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
LDB2O43679 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
LDB2O43679 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LDB2O43679 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LDB2O43679 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.16■□□□□ 0.5
LDB2O43679 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.16■□□□□ 0.5
LDB2O43679 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LDB2O43679 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.16■□□□□ 0.5
LDB2O43679 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms