Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLOCKO15516 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.31■□□□□ 0.36
CLOCKO15516 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.31■□□□□ 0.36
CLOCKO15516 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.31■□□□□ 0.36
CLOCKO15516 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLOCKO15516 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.31■□□□□ 0.36
CLOCKO15516 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CLOCKO15516 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.31■□□□□ 0.36
CLOCKO15516 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.31■□□□□ 0.36
CLOCKO15516 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.31■□□□□ 0.36
CLOCKO15516 AD000864.1-201ENST00000624076 2295 ntBASIC17.31■□□□□ 0.36
CLOCKO15516 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.31■□□□□ 0.36
CLOCKO15516 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLOCKO15516 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLOCKO15516 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
CLOCKO15516 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLOCKO15516 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.3■□□□□ 0.36
CLOCKO15516 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.3■□□□□ 0.36
CLOCKO15516 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLOCKO15516 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.3■□□□□ 0.36
CLOCKO15516 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.3■□□□□ 0.36
CLOCKO15516 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLOCKO15516 RPS2P55-201ENST00000397318 883 ntBASIC17.3■□□□□ 0.36
CLOCKO15516 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.3■□□□□ 0.36
CLOCKO15516 AC107956.1-201ENST00000494359 873 ntBASIC17.3■□□□□ 0.36
CLOCKO15516 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.3■□□□□ 0.36
CLOCKO15516 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.3■□□□□ 0.36
CLOCKO15516 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 HLA-A-209ENST00000638375 975 ntBASIC17.3■□□□□ 0.36
CLOCKO15516 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CLOCKO15516 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 KRT8P41-201ENST00000533985 1514 ntBASIC17.3■□□□□ 0.36
CLOCKO15516 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLOCKO15516 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.3■□□□□ 0.36
CLOCKO15516 NBPF21P-201ENST00000425093 1451 ntBASIC17.3■□□□□ 0.36
CLOCKO15516 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.3■□□□□ 0.36
CLOCKO15516 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLOCKO15516 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.29■□□□□ 0.36
CLOCKO15516 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
CLOCKO15516 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.29■□□□□ 0.36
CLOCKO15516 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.29■□□□□ 0.36
CLOCKO15516 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 AC012618.2-201ENST00000428058 849 ntBASIC17.29■□□□□ 0.36
CLOCKO15516 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.29■□□□□ 0.36
CLOCKO15516 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.29■□□□□ 0.36
CLOCKO15516 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.29■□□□□ 0.36
CLOCKO15516 AP001412.1-201ENST00000608405 714 ntBASIC17.29■□□□□ 0.36
CLOCKO15516 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLOCKO15516 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.29■□□□□ 0.36
CLOCKO15516 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 AL135905.2-201ENST00000584934 1404 ntBASIC17.29■□□□□ 0.36
CLOCKO15516 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
CLOCKO15516 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLOCKO15516 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.28■□□□□ 0.36
CLOCKO15516 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLOCKO15516 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CLOCKO15516 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CLOCKO15516 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLOCKO15516 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLOCKO15516 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLOCKO15516 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms