Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMAD9O15198 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 AC012313.1-201ENST00000593393 3059 ntBASIC16.53■□□□□ 0.24
SMAD9O15198 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.53■□□□□ 0.24
SMAD9O15198 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.53■□□□□ 0.24
SMAD9O15198 MYLKP1-201ENST00000509077 1580 ntBASIC16.53■□□□□ 0.24
SMAD9O15198 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SMAD9O15198 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.53■□□□□ 0.24
SMAD9O15198 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.53■□□□□ 0.24
SMAD9O15198 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.53■□□□□ 0.24
SMAD9O15198 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 AL049597.2-201ENST00000565575 961 ntBASIC16.53■□□□□ 0.24
SMAD9O15198 MIR3917-201ENST00000580971 93 ntBASIC16.53■□□□□ 0.24
SMAD9O15198 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.53■□□□□ 0.24
SMAD9O15198 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SMAD9O15198 PCDHB18P-201ENST00000524813 2368 ntBASIC16.53■□□□□ 0.24
SMAD9O15198 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMAD9O15198 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.53■□□□□ 0.24
SMAD9O15198 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMAD9O15198 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.52■□□□□ 0.24
SMAD9O15198 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.52■□□□□ 0.24
SMAD9O15198 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SMAD9O15198 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SMAD9O15198 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 SPDYE15P-201ENST00000424157 909 ntBASIC16.52■□□□□ 0.24
SMAD9O15198 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.52■□□□□ 0.24
SMAD9O15198 HOMER2P1-201ENST00000455653 964 ntBASIC16.52■□□□□ 0.24
SMAD9O15198 AC092647.4-201ENST00000457211 535 ntBASIC16.52■□□□□ 0.24
SMAD9O15198 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMAD9O15198 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.52■□□□□ 0.24
SMAD9O15198 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
SMAD9O15198 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SMAD9O15198 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMAD9O15198 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.52■□□□□ 0.23
SMAD9O15198 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMAD9O15198 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMAD9O15198 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SMAD9O15198 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SMAD9O15198 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SMAD9O15198 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.51■□□□□ 0.23
SMAD9O15198 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.51■□□□□ 0.23
SMAD9O15198 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.51■□□□□ 0.23
SMAD9O15198 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.51■□□□□ 0.23
SMAD9O15198 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.51■□□□□ 0.23
SMAD9O15198 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SMAD9O15198 STARP1-201ENST00000397973 869 ntBASIC16.51■□□□□ 0.23
SMAD9O15198 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMAD9O15198 FAM8A6P-201ENST00000407496 1135 ntBASIC16.51■□□□□ 0.23
SMAD9O15198 KRT18P38-201ENST00000449496 1282 ntBASIC16.51■□□□□ 0.23
SMAD9O15198 AL359075.1-203ENST00000462729 1002 ntBASIC16.51■□□□□ 0.23
SMAD9O15198 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.51■□□□□ 0.23
SMAD9O15198 AC034232.1-201ENST00000506026 1064 ntBASIC16.51■□□□□ 0.23
SMAD9O15198 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.51■□□□□ 0.23
SMAD9O15198 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.51■□□□□ 0.23
SMAD9O15198 MIR3180-4-201ENST00000582223 153 ntBASIC16.51■□□□□ 0.23
SMAD9O15198 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.51■□□□□ 0.23
SMAD9O15198 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.51■□□□□ 0.23
SMAD9O15198 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SMAD9O15198 AL157888.1-201ENST00000631930 593 ntBASIC16.51■□□□□ 0.23
SMAD9O15198 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms