Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3D1O14617 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.05■□□□□ 0.32
AP3D1O14617 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3D1O14617 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3D1O14617 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
AP3D1O14617 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
AP3D1O14617 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.04■□□□□ 0.32
AP3D1O14617 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 AP000593.1-201ENST00000393668 712 ntBASIC17.04■□□□□ 0.32
AP3D1O14617 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3D1O14617 AC093827.2-201ENST00000512654 315 ntBASIC17.04■□□□□ 0.32
AP3D1O14617 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.04■□□□□ 0.32
AP3D1O14617 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3D1O14617 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
AP3D1O14617 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3D1O14617 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3D1O14617 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
AP3D1O14617 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
AP3D1O14617 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3D1O14617 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3D1O14617 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.03■□□□□ 0.32
AP3D1O14617 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
AP3D1O14617 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3D1O14617 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3D1O14617 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3D1O14617 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
AP3D1O14617 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3D1O14617 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
AP3D1O14617 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3D1O14617 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3D1O14617 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
AP3D1O14617 MIR564-202ENST00000385049 94 ntBASIC17.03■□□□□ 0.32
AP3D1O14617 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.03■□□□□ 0.32
AP3D1O14617 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3D1O14617 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.03■□□□□ 0.32
AP3D1O14617 AL023803.3-201ENST00000615559 522 ntBASIC17.03■□□□□ 0.32
AP3D1O14617 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
AP3D1O14617 KRT8P9-201ENST00000558927 1449 ntBASIC17.03■□□□□ 0.32
AP3D1O14617 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
AP3D1O14617 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3D1O14617 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3D1O14617 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3D1O14617 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
AP3D1O14617 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
AP3D1O14617 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3D1O14617 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
AP3D1O14617 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3D1O14617 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
AP3D1O14617 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3D1O14617 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
AP3D1O14617 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
AP3D1O14617 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3D1O14617 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3D1O14617 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3D1O14617 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3D1O14617 AL596275.1-201ENST00000423464 877 ntBASIC17.02■□□□□ 0.32
AP3D1O14617 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3D1O14617 AP003041.3-201ENST00000527151 707 ntBASIC17.02■□□□□ 0.32
AP3D1O14617 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.02■□□□□ 0.32
AP3D1O14617 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3D1O14617 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3D1O14617 AC066615.1-201ENST00000640911 628 ntBASIC17.02■□□□□ 0.32
AP3D1O14617 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3D1O14617 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3D1O14617 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.02■□□□□ 0.31
AP3D1O14617 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP3D1O14617 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.02■□□□□ 0.31
AP3D1O14617 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP3D1O14617 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3D1O14617 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.02■□□□□ 0.31
AP3D1O14617 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP3D1O14617 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
AP3D1O14617 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.01■□□□□ 0.31
AP3D1O14617 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
AP3D1O14617 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3D1O14617 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3D1O14617 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3D1O14617 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
AP3D1O14617 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3D1O14617 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.01■□□□□ 0.31
AP3D1O14617 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.01■□□□□ 0.31
AP3D1O14617 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.01■□□□□ 0.31
AP3D1O14617 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3D1O14617 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP3D1O14617 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms