Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 ABHD17AP1-201ENST00000358206 933 ntBASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 AL355355.2-201ENST00000442321 338 ntBASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 UBE2SP1-201ENST00000450587 669 ntBASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 REXO1L10P-201ENST00000615707 1290 ntBASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 REXO1L12P-201ENST00000622156 912 ntBASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 KRT8P7-201ENST00000533003 1432 ntBASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 HOXB1-202ENST00000577092 1414 ntBASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00959A0A1B0GUT2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 KRT18P23-201ENST00000435622 1283 ntBASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 AC009065.1-201ENST00000564055 1225 ntBASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 MIR4674-201ENST00000582457 87 ntBASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00959A0A1B0GUT2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 AC012618.2-201ENST00000428058 849 ntBASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 AC113410.3-201ENST00000623366 203 ntBASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 AL049637.2-201ENST00000641778 930 ntBASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00959A0A1B0GUT2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms