Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 SBF1P1-201ENST00000444527 5631 ntBASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 AC007326.2-201ENST00000624224 7579 ntBASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 LONRF2P2-201ENST00000439212 571 ntBASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 AC097358.2-201ENST00000607541 1159 ntBASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 AL096828.2-201ENST00000567259 1965 ntBASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 FES-204ENST00000414248 2327 ntTSL 2 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LINC01558Q9Y6Z2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 AC008556.1-201ENST00000610908 2040 ntBASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms