Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 KRT18P22-201ENST00000402024 1347 ntBASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP46A1Q9Y6A2 AC134043.2-201ENST00000624206 2238 ntBASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 ECEL1P3-201ENST00000427961 737 ntBASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CYP46A1Q9Y6A2 HTR7P1-202ENST00000624664 4411 ntBASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CYP46A1Q9Y6A2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 MIR3917-201ENST00000580971 93 ntBASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 AC092865.7-201ENST00000641832 219 ntBASIC21.59■■□□□ 1.05
CYP46A1Q9Y6A2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms