Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 AC116407.4-201ENST00000623319 1061 ntBASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC4Q9Y5F7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 AC005332.3-201ENST00000589904 676 ntBASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 AC011498.5-201ENST00000592027 486 ntBASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 IER3-202ENST00000376377 1350 ntBASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 KRT89P-201ENST00000620027 1478 ntBASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGC4Q9Y5F7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 IGHGP-201ENST00000390555 1178 ntBASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 Z83836.1-201ENST00000624605 1642 ntBASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 AP000550.4-202ENST00000639755 178 ntBASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGC4Q9Y5F7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 BICD1-207ENST00000551848 1962 ntBASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 AC008687.5-201ENST00000593746 558 ntBASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 AC091076.1-201ENST00000610741 619 ntBASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 AC004263.2-201ENST00000617183 678 ntBASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 LINC00602-201ENST00000629776 2065 ntBASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 AL096828.2-201ENST00000567259 1965 ntBASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms