Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AL163051.1-201ENST00000569214 1512 ntBASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 KRT18P41-201ENST00000518924 1277 ntBASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 AC079602.3-201ENST00000623931 403 ntBASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RPH3AQ9Y2J0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
RPH3AQ9Y2J0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 HYMAI.1-201ENST00000620949 238 ntBASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RPH3AQ9Y2J0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 HBZP1-201ENST00000354915 429 ntBASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 AL450487.1-201ENST00000426799 995 ntBASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 AL136038.4-201ENST00000603606 1261 ntBASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 AC083849.1-201ENST00000615227 514 ntBASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.69■□□□□ 0.26
RPH3AQ9Y2J0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RPH3AQ9Y2J0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms