Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 AFG3L1P-217ENST00000557444 2447 ntBASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
CDK11AQ9UQ88 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 KIRREL3-AS3-201ENST00000404882 831 ntBASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 LBH-204ENST00000406087 559 ntTSL 4 BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 AL591424.1-201ENST00000442569 1213 ntBASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 SRP19-202ENST00000445150 833 ntTSL 2 BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 AC092183.1-201ENST00000469884 875 ntBASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC28.05■■■□□ 2.08
CDK11AQ9UQ88 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 FAM220CP-201ENST00000395253 831 ntBASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 AC034105.1-201ENST00000563488 319 ntBASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 AC008735.5-201ENST00000623544 497 ntBASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 AL499627.1-201ENST00000569373 2188 ntBASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDK11AQ9UQ88 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 AC098831.1-202ENST00000438821 336 ntBASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 AC012640.2-201ENST00000561606 901 ntBASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDK11AQ9UQ88 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 AC092910.1-201ENST00000482027 1129 ntBASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 AC140113.2-201ENST00000604370 208 ntBASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDK11AQ9UQ88 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.08
CDK11AQ9UQ88 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 MED15P5-201ENST00000423150 992 ntBASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 Z83851.2-201ENST00000609564 659 ntBASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 AP000867.4-201ENST00000641616 219 ntBASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDK11AQ9UQ88 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms