Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 FAM207BP-201ENST00000447172 505 ntBASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 AF186192.3-201ENST00000583427 947 ntBASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 MTMR9LP-203ENST00000426597 1545 ntBASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGB4Q9UN71 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 FAM201B-201ENST00000458407 597 ntBASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGB4Q9UN71 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 OR6D1P-203ENST00000641209 4860 ntBASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 CKBP1-201ENST00000565489 1086 ntBASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 AC130371.2-201ENST00000619443 611 ntBASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 AC012317.2-201ENST00000623305 2251 ntBASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB4Q9UN71 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 CROCCP1-201ENST00000426910 5675 ntBASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 AL162741.1-201ENST00000565563 1558 ntBASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 AL135905.2-201ENST00000584934 1404 ntBASIC17.67■□□□□ 0.42
PCDHGB4Q9UN71 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms