Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 RNF126P1-202ENST00000569893 925 ntBASIC20.94■□□□□ 0.94
DDX41Q9UJV9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 AL354751.1-201ENST00000412768 1863 ntBASIC20.94■□□□□ 0.94
DDX41Q9UJV9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX41Q9UJV9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 MIR3180-4-201ENST00000582223 153 ntBASIC20.93■□□□□ 0.94
DDX41Q9UJV9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX41Q9UJV9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 BICD1-207ENST00000551848 1962 ntBASIC20.92■□□□□ 0.94
DDX41Q9UJV9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 TSPY22P-201ENST00000427496 604 ntBASIC20.92■□□□□ 0.94
DDX41Q9UJV9 PVRIG2P-201ENST00000435460 978 ntBASIC20.92■□□□□ 0.94
DDX41Q9UJV9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
DDX41Q9UJV9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.91■□□□□ 0.94
DDX41Q9UJV9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms