Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CXXC1Q9P0U4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CXXC1Q9P0U4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 AC254562.1-201ENST00000417586 456 ntBASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 KRT18P65-201ENST00000439811 1286 ntBASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 HLA-J-203ENST00000494367 1087 ntBASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 AL022326.1-202ENST00000641533 845 ntBASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 AC079776.2-201ENST00000641154 1609 ntBASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CXXC1Q9P0U4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 LINC01126-201ENST00000623515 1646 ntBASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 AL645939.2-201ENST00000427340 991 ntBASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 AC112698.1-201ENST00000510299 916 ntBASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXXC1Q9P0U4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 CNN2P11-201ENST00000429351 262 ntBASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.44■□□□□ 0.7
CXXC1Q9P0U4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.43■□□□□ 0.7
CXXC1Q9P0U4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms