Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 PCDHA12-202ENST00000613593 2588 ntBASIC17.24■□□□□ 0.35
VAPAQ9P0L0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VAPAQ9P0L0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPAQ9P0L0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 AC106820.2-201ENST00000563775 3264 ntBASIC17.22■□□□□ 0.35
VAPAQ9P0L0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 HCG11-201ENST00000411553 5696 ntBASIC17.22■□□□□ 0.35
VAPAQ9P0L0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPAQ9P0L0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 CRYGFP-201ENST00000418459 633 ntBASIC17.21■□□□□ 0.35
VAPAQ9P0L0 KRT18P23-201ENST00000435622 1283 ntBASIC17.21■□□□□ 0.35
VAPAQ9P0L0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
VAPAQ9P0L0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VAPAQ9P0L0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
VAPAQ9P0L0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.2■□□□□ 0.34
VAPAQ9P0L0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms