Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NPAP1Q9NZP6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAP1Q9NZP6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPAP1Q9NZP6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.61■□□□□ 0.25
NPAP1Q9NZP6 AD000864.1-201ENST00000624076 2295 ntBASIC16.61■□□□□ 0.25
NPAP1Q9NZP6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAP1Q9NZP6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 HMGA1P5-201ENST00000412453 271 ntBASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 LIN28AP1-201ENST00000429574 405 ntBASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 TSPY23P-201ENST00000440136 739 ntBASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 ATP5G1P1-201ENST00000448724 379 ntBASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 CA15P1-201ENST00000481698 905 ntBASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAP1Q9NZP6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.58■□□□□ 0.25
NPAP1Q9NZP6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAP1Q9NZP6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.58■□□□□ 0.25
NPAP1Q9NZP6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAP1Q9NZP6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAP1Q9NZP6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAP1Q9NZP6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NPAP1Q9NZP6 AL645608.8-201ENST00000606034 2086 ntBASIC16.58■□□□□ 0.25
NPAP1Q9NZP6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAP1Q9NZP6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAP1Q9NZP6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NPAP1Q9NZP6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NPAP1Q9NZP6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NPAP1Q9NZP6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAP1Q9NZP6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAP1Q9NZP6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms