Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.08■□□□□ 0.81
SPTLC3Q9NUV7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC3Q9NUV7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC3Q9NUV7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SPTLC3Q9NUV7 AC026366.1-201ENST00000488803 879 ntBASIC20.08■□□□□ 0.81
SPTLC3Q9NUV7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SPTLC3Q9NUV7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.08■□□□□ 0.81
SPTLC3Q9NUV7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.08■□□□□ 0.81
SPTLC3Q9NUV7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SPTLC3Q9NUV7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SPTLC3Q9NUV7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 AC105020.1-201ENST00000435356 2205 ntBASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 AC239809.2-201ENST00000415381 517 ntBASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 AC092666.2-201ENST00000613287 246 ntBASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC3Q9NUV7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 HLA-L-209ENST00000420110 1011 ntBASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 KRT16P5-201ENST00000455284 522 ntBASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SPTLC3Q9NUV7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms