Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 MED15P5-201ENST00000423150 992 ntBASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRMT13Q9NUP7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 AC073130.3-201ENST00000624389 2278 ntBASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 AL691403.2-201ENST00000618460 490 ntBASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.92■□□□□ 0.78
TRMT13Q9NUP7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 AC005082.1-201ENST00000413042 2259 ntBASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 KRT18P65-201ENST00000439811 1286 ntBASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 RNA5SP415-201ENST00000517246 115 ntBASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.91■□□□□ 0.78
TRMT13Q9NUP7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 NKAPP1-205ENST00000585790 367 ntBASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 Z83851.2-201ENST00000609564 659 ntBASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 FAM197Y3-203ENST00000618346 717 ntBASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.9■□□□□ 0.78
TRMT13Q9NUP7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRMT13Q9NUP7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRMT13Q9NUP7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRMT13Q9NUP7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms