Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 AC240504.1-201ENST00000395709 845 ntBASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 AC008040.2-201ENST00000461049 708 ntBASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 RWDD4P1-201ENST00000488019 565 ntBASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 AC026366.1-201ENST00000488803 879 ntBASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 AC012317.2-201ENST00000623305 2251 ntBASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
FOXD4L1Q9NU39 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.89■■□□□ 1.1
FOXD4L1Q9NU39 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.89■■□□□ 1.1
FOXD4L1Q9NU39 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.89■■□□□ 1.1
FOXD4L1Q9NU39 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
FOXD4L1Q9NU39 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 RPL12P24-201ENST00000474907 486 ntBASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 AC090192.1-201ENST00000517740 490 ntBASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 AL445675.2-201ENST00000620291 557 ntBASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 MYC-208ENST00000641036 567 ntBASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXD4L1Q9NU39 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 OR6D1P-202ENST00000641007 5290 ntBASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 HLA-L-209ENST00000420110 1011 ntBASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 PRSS44-201ENST00000515154 1146 ntBASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXD4L1Q9NU39 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 AC090079.2-201ENST00000575289 768 ntBASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 AC124016.1-201ENST00000609552 612 ntBASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 AC092666.2-201ENST00000613287 246 ntBASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 AL109924.4-201ENST00000623089 670 ntBASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXD4L1Q9NU39 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms