Protein–RNA interactions for Protein: Q9NST1

PNPLA3, Patatin-like phospholipase domain-containing protein 3, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3Q9NST1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PNPLA3Q9NST1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 AC104417.2-201ENST00000562989 1793 ntBASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 AC113347.1-201ENST00000413321 391 ntBASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 KRT18P57-201ENST00000443599 1254 ntBASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 DGCR10-201ENST00000609839 495 ntBASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 HLA-A-209ENST00000638375 975 ntBASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.49■□□□□ 0.39
PNPLA3Q9NST1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 CRYGFP-201ENST00000418459 633 ntBASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 AC097488.1-201ENST00000507834 756 ntBASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PNPLA3Q9NST1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms