Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 FLJ13224-201ENST00000313737 1514 ntBASIC16.94■□□□□ 0.3
POLE3Q9NRF9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 SEC1P-202ENST00000473944 940 ntBASIC16.93■□□□□ 0.3
POLE3Q9NRF9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 AC008687.5-201ENST00000593746 558 ntBASIC16.93■□□□□ 0.3
POLE3Q9NRF9 AC092865.7-201ENST00000641832 219 ntBASIC16.93■□□□□ 0.3
POLE3Q9NRF9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 CROCCP1-201ENST00000426910 5675 ntBASIC16.93■□□□□ 0.3
POLE3Q9NRF9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLE3Q9NRF9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 ECEL1P3-201ENST00000427961 737 ntBASIC16.92■□□□□ 0.3
POLE3Q9NRF9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 AC145285.6-201ENST00000604632 637 ntBASIC16.92■□□□□ 0.3
POLE3Q9NRF9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 PHGDH-209ENST00000641074 1780 ntBASIC16.92■□□□□ 0.3
POLE3Q9NRF9 NOC2LP2-201ENST00000407594 1944 ntBASIC16.92■□□□□ 0.3
POLE3Q9NRF9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
POLE3Q9NRF9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 AC138028.4-201ENST00000564984 1845 ntBASIC16.91■□□□□ 0.3
POLE3Q9NRF9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.91■□□□□ 0.3
POLE3Q9NRF9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms