Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 AP003041.3-201ENST00000527151 707 ntBASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 MIR3180-4-201ENST00000582223 153 ntBASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 CRYGFP-201ENST00000418459 633 ntBASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 AL353719.1-201ENST00000566847 864 ntBASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 AP005242.2-201ENST00000580065 1175 ntBASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 AC124067.4-201ENST00000519691 2379 ntBASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC52A3Q9NQ40 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 AC084018.2-201ENST00000613093 2607 ntBASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 AC113410.3-201ENST00000623366 203 ntBASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 CROCCP2-202ENST00000412962 2773 ntBASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC52A3Q9NQ40 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC52A3Q9NQ40 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SLC52A3Q9NQ40 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.21■□□□□ 0.34
SLC52A3Q9NQ40 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC52A3Q9NQ40 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms