Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 DUSP5P1-201ENST00000441325 1139 ntBASIC19.14■□□□□ 0.65
CD248Q9HCU0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 VENTXP5-201ENST00000523979 775 ntBASIC19.14■□□□□ 0.65
CD248Q9HCU0 KRT126P-201ENST00000549467 1181 ntBASIC19.14■□□□□ 0.65
CD248Q9HCU0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.14■□□□□ 0.65
CD248Q9HCU0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD248Q9HCU0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 GPAT2P1-201ENST00000444924 1672 ntBASIC19.13■□□□□ 0.65
CD248Q9HCU0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.13■□□□□ 0.65
CD248Q9HCU0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD248Q9HCU0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.13■□□□□ 0.65
CD248Q9HCU0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 KRT18P48-201ENST00000434763 852 ntBASIC19.12■□□□□ 0.65
CD248Q9HCU0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 AC090340.1-201ENST00000620778 4980 ntBASIC19.12■□□□□ 0.65
CD248Q9HCU0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.12■□□□□ 0.65
CD248Q9HCU0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.12■□□□□ 0.65
CD248Q9HCU0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD248Q9HCU0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CD248Q9HCU0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.11■□□□□ 0.65
CD248Q9HCU0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.11■□□□□ 0.65
CD248Q9HCU0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 LINC01311-201ENST00000565162 1445 ntBASIC19.11■□□□□ 0.65
CD248Q9HCU0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.11■□□□□ 0.65
CD248Q9HCU0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.11■□□□□ 0.65
CD248Q9HCU0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
CD248Q9HCU0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD248Q9HCU0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms