Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.68■□□□□ 0.74
CDT1Q9H211 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDT1Q9H211 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.67■□□□□ 0.74
CDT1Q9H211 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.67■□□□□ 0.74
CDT1Q9H211 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.67■□□□□ 0.74
CDT1Q9H211 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 AC104581.1-202ENST00000635932 2618 ntBASIC19.67■□□□□ 0.74
CDT1Q9H211 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
CDT1Q9H211 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 IGHV3-47-201ENST00000425060 335 ntBASIC19.67■□□□□ 0.74
CDT1Q9H211 KRT17P6-201ENST00000453795 1220 ntBASIC19.67■□□□□ 0.74
CDT1Q9H211 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CDT1Q9H211 AC104819.1-201ENST00000504587 486 ntBASIC19.67■□□□□ 0.74
CDT1Q9H211 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 KRT126P-201ENST00000549467 1181 ntBASIC19.67■□□□□ 0.74
CDT1Q9H211 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.67■□□□□ 0.74
CDT1Q9H211 PRELID1P1-202ENST00000567272 903 ntBASIC19.67■□□□□ 0.74
CDT1Q9H211 AC011840.4-201ENST00000578471 627 ntBASIC19.67■□□□□ 0.74
CDT1Q9H211 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CDT1Q9H211 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CDT1Q9H211 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.67■□□□□ 0.74
CDT1Q9H211 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 AC135776.1-201ENST00000319817 2481 ntBASIC19.67■□□□□ 0.74
CDT1Q9H211 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
CDT1Q9H211 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CDT1Q9H211 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CDT1Q9H211 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDT1Q9H211 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.67■□□□□ 0.74
CDT1Q9H211 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.66■□□□□ 0.74
CDT1Q9H211 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.66■□□□□ 0.74
CDT1Q9H211 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 AC009113.1-201ENST00000570267 2443 ntBASIC19.66■□□□□ 0.74
CDT1Q9H211 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.66■□□□□ 0.74
CDT1Q9H211 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.66■□□□□ 0.74
CDT1Q9H211 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.66■□□□□ 0.74
CDT1Q9H211 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDT1Q9H211 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDT1Q9H211 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.66■□□□□ 0.74
CDT1Q9H211 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
CDT1Q9H211 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDT1Q9H211 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDT1Q9H211 MTCL1P1-201ENST00000446207 792 ntBASIC19.66■□□□□ 0.74
CDT1Q9H211 NUS1P1-201ENST00000446295 882 ntBASIC19.66■□□□□ 0.74
CDT1Q9H211 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDT1Q9H211 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.66■□□□□ 0.74
CDT1Q9H211 VENTXP7-201ENST00000475503 772 ntBASIC19.66■□□□□ 0.74
CDT1Q9H211 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.66■□□□□ 0.74
CDT1Q9H211 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.66■□□□□ 0.74
CDT1Q9H211 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.66■□□□□ 0.74
CDT1Q9H211 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDT1Q9H211 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDT1Q9H211 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDT1Q9H211 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CDT1Q9H211 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.65■□□□□ 0.74
CDT1Q9H211 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.65■□□□□ 0.74
CDT1Q9H211 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.65■□□□□ 0.74
CDT1Q9H211 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.65■□□□□ 0.74
CDT1Q9H211 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.65■□□□□ 0.74
CDT1Q9H211 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.65■□□□□ 0.74
CDT1Q9H211 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDT1Q9H211 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDT1Q9H211 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.65■□□□□ 0.74
CDT1Q9H211 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.64■□□□□ 0.74
CDT1Q9H211 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.64■□□□□ 0.74
CDT1Q9H211 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDT1Q9H211 AL096828.2-201ENST00000567259 1965 ntBASIC19.64■□□□□ 0.74
CDT1Q9H211 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDT1Q9H211 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
CDT1Q9H211 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms