Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF38Q9H0F5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.83■□□□□ 0.61
RNF38Q9H0F5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF38Q9H0F5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF38Q9H0F5 AC087289.5-201ENST00000586076 3175 ntBASIC18.83■□□□□ 0.61
RNF38Q9H0F5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF38Q9H0F5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF38Q9H0F5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 AC079781.3-201ENST00000449110 356 ntBASIC18.83■□□□□ 0.6
RNF38Q9H0F5 FDX1P1-201ENST00000449115 551 ntBASIC18.83■□□□□ 0.6
RNF38Q9H0F5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 AC005336.2-201ENST00000593183 939 ntBASIC18.83■□□□□ 0.6
RNF38Q9H0F5 BNIP3P18-201ENST00000593976 575 ntBASIC18.83■□□□□ 0.6
RNF38Q9H0F5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 AC104692.2-201ENST00000603054 253 ntBASIC18.83■□□□□ 0.6
RNF38Q9H0F5 AC009154.2-201ENST00000621177 724 ntBASIC18.83■□□□□ 0.6
RNF38Q9H0F5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF38Q9H0F5 ESPNP-201ENST00000270691 2015 ntBASIC18.83■□□□□ 0.6
RNF38Q9H0F5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 GMCL1P1-201ENST00000463439 1581 ntBASIC18.82■□□□□ 0.6
RNF38Q9H0F5 AC098818.2-201ENST00000564925 2320 ntBASIC18.82■□□□□ 0.6
RNF38Q9H0F5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 NUS1P2-201ENST00000417358 873 ntBASIC18.82■□□□□ 0.6
RNF38Q9H0F5 MTCL1P1-201ENST00000446207 792 ntBASIC18.82■□□□□ 0.6
RNF38Q9H0F5 KRT16P4-201ENST00000453883 522 ntBASIC18.82■□□□□ 0.6
RNF38Q9H0F5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 AL031008.1-201ENST00000619963 541 ntBASIC18.82■□□□□ 0.6
RNF38Q9H0F5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 AIRN-201ENST00000601203 4374 ntBASIC18.82■□□□□ 0.6
RNF38Q9H0F5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF38Q9H0F5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 LINC01711-201ENST00000598340 967 ntBASIC18.81■□□□□ 0.6
RNF38Q9H0F5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.81■□□□□ 0.6
RNF38Q9H0F5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF38Q9H0F5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF38Q9H0F5 POM121L3P-201ENST00000419331 1163 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms