Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NBPF3Q9H094 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF3Q9H094 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF3Q9H094 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
NBPF3Q9H094 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.58■■□□□ 1.05
NBPF3Q9H094 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF3Q9H094 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.58■■□□□ 1.05
NBPF3Q9H094 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NBPF3Q9H094 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.58■■□□□ 1.05
NBPF3Q9H094 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.58■■□□□ 1.05
NBPF3Q9H094 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.58■■□□□ 1.05
NBPF3Q9H094 AC004263.2-201ENST00000617183 678 ntBASIC21.58■■□□□ 1.05
NBPF3Q9H094 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.58■■□□□ 1.05
NBPF3Q9H094 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.58■■□□□ 1.04
NBPF3Q9H094 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF3Q9H094 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF3Q9H094 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF3Q9H094 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF3Q9H094 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF3Q9H094 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF3Q9H094 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
NBPF3Q9H094 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NBPF3Q9H094 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 AP003733.1-201ENST00000491725 852 ntBASIC21.57■■□□□ 1.04
NBPF3Q9H094 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 AC005332.3-201ENST00000589904 676 ntBASIC21.57■■□□□ 1.04
NBPF3Q9H094 AC011498.5-201ENST00000592027 486 ntBASIC21.57■■□□□ 1.04
NBPF3Q9H094 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 Z83836.1-201ENST00000624605 1642 ntBASIC21.57■■□□□ 1.04
NBPF3Q9H094 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NBPF3Q9H094 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.57■■□□□ 1.04
NBPF3Q9H094 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 AL096828.2-201ENST00000567259 1965 ntBASIC21.56■■□□□ 1.04
NBPF3Q9H094 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 UNC93B7-201ENST00000509439 705 ntBASIC21.56■■□□□ 1.04
NBPF3Q9H094 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.56■■□□□ 1.04
NBPF3Q9H094 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 AC135050.7-201ENST00000624508 2218 ntBASIC21.56■■□□□ 1.04
NBPF3Q9H094 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NBPF3Q9H094 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.56■■□□□ 1.04
NBPF3Q9H094 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 AC093010.1-201ENST00000473625 1624 ntBASIC21.55■■□□□ 1.04
NBPF3Q9H094 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 AC113404.2-201ENST00000507884 177 ntBASIC21.55■■□□□ 1.04
NBPF3Q9H094 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.55■■□□□ 1.04
NBPF3Q9H094 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NBPF3Q9H094 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms