Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 AC010525.1-201ENST00000585559 441 ntBASIC13.36□□□□□ -0.27
VAMP8Q9BV40 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP8Q9BV40 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 PHGDH-210ENST00000641115 1638 ntBASIC13.35□□□□□ -0.27
VAMP8Q9BV40 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 ZNRF2P2-203ENST00000454624 420 ntBASIC13.35□□□□□ -0.27
VAMP8Q9BV40 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
VAMP8Q9BV40 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 FEM1AP3-201ENST00000403722 1741 ntBASIC13.34□□□□□ -0.27
VAMP8Q9BV40 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 MACF1-219ENST00000484793 834 ntTSL 2 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 AC024909.3-201ENST00000611513 2257 ntBASIC13.34□□□□□ -0.27
VAMP8Q9BV40 LYSMD4-203ENST00000378904 2122 ntBASIC13.34□□□□□ -0.27
VAMP8Q9BV40 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.34□□□□□ -0.27
VAMP8Q9BV40 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP8Q9BV40 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms