Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 AP006294.2-201ENST00000641667 209 ntBASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.5□□□□□ -0.09
CHRDL1Q9BU40 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 SNORA78-201ENST00000459373 127 ntBASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHRDL1Q9BU40 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 AC008556.1-201ENST00000610908 2040 ntBASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 SIRPAP1-201ENST00000448467 1770 ntBASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 RBM17P1-201ENST00000453646 1190 ntBASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 MIR4785-201ENST00000585005 73 ntBASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHRDL1Q9BU40 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms