Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.08■□□□□ 0.49
LRFN3Q9BTN0 FEM1AP4-201ENST00000443167 1987 ntBASIC18.08■□□□□ 0.49
LRFN3Q9BTN0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.08■□□□□ 0.49
LRFN3Q9BTN0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRFN3Q9BTN0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 AL627223.1-201ENST00000416693 442 ntBASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 RHOQP3-201ENST00000437982 621 ntBASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRFN3Q9BTN0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 PMPCAP1-201ENST00000508114 1576 ntBASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 DDX43P3-201ENST00000441064 443 ntBASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 AC116407.2-201ENST00000613639 860 ntBASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 AC010654.1-201ENST00000615722 808 ntBASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN3Q9BTN0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 LINC01126-201ENST00000623515 1646 ntBASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 TUBB3P1-201ENST00000405796 1332 ntBASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 RPS15P9-201ENST00000494093 319 ntBASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRFN3Q9BTN0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.04■□□□□ 0.48
LRFN3Q9BTN0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms