Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 AD000864.1-201ENST00000624076 2295 ntBASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 AC005521.1-201ENST00000393351 872 ntBASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 RN7SL850P-201ENST00000579959 291 ntBASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 AC080080.1-201ENST00000625121 2420 ntBASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 AC113347.1-201ENST00000413321 391 ntBASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 TMPOP1-202ENST00000424642 1267 ntBASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 ECEL1P2-202ENST00000465689 757 ntBASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBA1CQ9BQE3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.21■□□□□ 0.34
TUBA1CQ9BQE3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TUBA1CQ9BQE3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TUBA1CQ9BQE3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TUBA1CQ9BQE3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 AC104417.2-201ENST00000562989 1793 ntBASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 INGX-201ENST00000359239 846 ntBASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 MIR1224-201ENST00000408193 85 ntBASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBA1CQ9BQE3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms