Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CHCHD2P8-201ENST00000429873 447 ntBASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 WIZP1-201ENST00000531444 2299 ntBASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PRICKLE1Q96MT3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 AP002414.4-201ENST00000589764 1148 ntBASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 AC004263.2-201ENST00000617183 678 ntBASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRICKLE1Q96MT3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 AC073592.3-201ENST00000625118 1834 ntBASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 KRT18P56-201ENST00000507275 550 ntBASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 AC120498.9-201ENST00000339021 3867 ntBASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 AL353692.3-201ENST00000407031 1396 ntBASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE1Q96MT3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PRICKLE1Q96MT3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRICKLE1Q96MT3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRICKLE1Q96MT3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRICKLE1Q96MT3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.76■□□□□ 0.59
PRICKLE1Q96MT3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms