Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.07■□□□□ 0.16
AP3S1Q92572 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.07■□□□□ 0.16
AP3S1Q92572 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
AP3S1Q92572 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP3S1Q92572 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
AP3S1Q92572 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
AP3S1Q92572 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
AP3S1Q92572 AC046158.3-201ENST00000624947 2558 ntBASIC16.06■□□□□ 0.16
AP3S1Q92572 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
AP3S1Q92572 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.06■□□□□ 0.16
AP3S1Q92572 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
AP3S1Q92572 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
AP3S1Q92572 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.06■□□□□ 0.16
AP3S1Q92572 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.06■□□□□ 0.16
AP3S1Q92572 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 AL138688.1-201ENST00000624851 1594 ntBASIC16.06■□□□□ 0.16
AP3S1Q92572 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP3S1Q92572 KRT8P3-201ENST00000519669 1449 ntBASIC16.06■□□□□ 0.16
AP3S1Q92572 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.06■□□□□ 0.16
AP3S1Q92572 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.06■□□□□ 0.16
AP3S1Q92572 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.06■□□□□ 0.16
AP3S1Q92572 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.06■□□□□ 0.16
AP3S1Q92572 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.06■□□□□ 0.16
AP3S1Q92572 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
AP3S1Q92572 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
AP3S1Q92572 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP3S1Q92572 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
AP3S1Q92572 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
AP3S1Q92572 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.05■□□□□ 0.16
AP3S1Q92572 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.05■□□□□ 0.16
AP3S1Q92572 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.05■□□□□ 0.16
AP3S1Q92572 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.05■□□□□ 0.16
AP3S1Q92572 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
AP3S1Q92572 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.05■□□□□ 0.16
AP3S1Q92572 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.05■□□□□ 0.16
AP3S1Q92572 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.05■□□□□ 0.16
AP3S1Q92572 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.05■□□□□ 0.16
AP3S1Q92572 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.05■□□□□ 0.16
AP3S1Q92572 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.05■□□□□ 0.16
AP3S1Q92572 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 AC006557.6-201ENST00000623071 864 ntBASIC16.05■□□□□ 0.16
AP3S1Q92572 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.05■□□□□ 0.16
AP3S1Q92572 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
AP3S1Q92572 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
AP3S1Q92572 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
AP3S1Q92572 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.05■□□□□ 0.16
AP3S1Q92572 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 PHGDH-209ENST00000641074 1780 ntBASIC16.05■□□□□ 0.16
AP3S1Q92572 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
AP3S1Q92572 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.05■□□□□ 0.16
AP3S1Q92572 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
AP3S1Q92572 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP3S1Q92572 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.04■□□□□ 0.16
AP3S1Q92572 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
AP3S1Q92572 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
AP3S1Q92572 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.04■□□□□ 0.16
AP3S1Q92572 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
AP3S1Q92572 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms