Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 SLC25A6P4-201ENST00000586535 553 ntBASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 AC098818.2-201ENST00000564925 2320 ntBASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 TP73-AS1-207ENST00000624167 988 ntBASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 AC125634.1-201ENST00000438758 1403 ntBASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
SH3RF3Q8TEJ3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 AC132008.2-207ENST00000454517 770 ntBASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 AC112698.1-201ENST00000510299 916 ntBASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 AC073592.3-201ENST00000625118 1834 ntBASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.54■■□□□ 1.04
SH3RF3Q8TEJ3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 AP000347.1-202ENST00000435868 847 ntBASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 PHGDH-209ENST00000641074 1780 ntBASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3RF3Q8TEJ3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms