Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 CD63-210ENST00000550776 870 ntTSL 5 BASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 AJ011932.1-201ENST00000621707 465 ntBASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 LINC01126-201ENST00000623515 1646 ntBASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 AC148477.5-201ENST00000625164 1645 ntBASIC24.18■■□□□ 1.46
COL22A1Q8NFW1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 KRT19P2-202ENST00000557173 1012 ntBASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 AC004817.3-201ENST00000602957 2129 ntBASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 AL805961.1-202ENST00000641562 540 ntBASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 CD99-202ENST00000381180 530 ntTSL 2 BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 RPS15P9-201ENST00000494093 319 ntBASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC24.17■■□□□ 1.46
COL22A1Q8NFW1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 AC109322.1-201ENST00000524499 1264 ntBASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 AL035252.4-201ENST00000624174 288 ntBASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL22A1Q8NFW1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC24.15■■□□□ 1.46
COL22A1Q8NFW1 PC-214ENST00000628663 1470 ntTSL 5 BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 FAM58CP-201ENST00000435741 640 ntBASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 ACTG1P14-201ENST00000446382 1122 ntBASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 AC023141.5-201ENST00000458585 616 ntBASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 AC091812.2-201ENST00000619081 385 ntBASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
COL22A1Q8NFW1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC24.14■■□□□ 1.45
COL22A1Q8NFW1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
COL22A1Q8NFW1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 KRT8P47-201ENST00000604727 1398 ntBASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
COL22A1Q8NFW1 AC125437.2-201ENST00000625180 2167 ntBASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms