Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 MIR3180-4-201ENST00000582223 153 ntBASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C11orf42Q8N5U0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 AC011270.2-201ENST00000624293 2550 ntBASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 FAM8A6P-201ENST00000407496 1135 ntBASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 MIR3917-201ENST00000580971 93 ntBASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 AC010240.3-201ENST00000607688 395 ntBASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 AC126763.1-201ENST00000552015 2118 ntBASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 AL163051.1-201ENST00000569214 1512 ntBASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 WIZP1-201ENST00000531444 2299 ntBASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.17■□□□□ 0.02
C11orf42Q8N5U0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 STARP1-201ENST00000397973 869 ntBASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 KRT18P38-201ENST00000449496 1282 ntBASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 MYC-208ENST00000641036 567 ntBASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C11orf42Q8N5U0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms