Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 DNAJB3-202ENST00000449667 1266 ntBASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 AC105339.3-201ENST00000560043 636 ntBASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.08■□□□□ 0.33
COL27A1Q8IZC6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.08■□□□□ 0.32
COL27A1Q8IZC6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL27A1Q8IZC6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL27A1Q8IZC6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
COL27A1Q8IZC6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL27A1Q8IZC6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
COL27A1Q8IZC6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
COL27A1Q8IZC6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL27A1Q8IZC6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL27A1Q8IZC6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 AL139424.1-201ENST00000607572 797 ntBASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 ESPNP-201ENST00000270691 2015 ntBASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 RPS2P28-201ENST00000314255 741 ntBASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 AP000867.4-201ENST00000641616 219 ntBASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
COL27A1Q8IZC6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL27A1Q8IZC6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 BX005266.1-201ENST00000473402 457 ntBASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
COL27A1Q8IZC6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms