Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 AC093827.2-201ENST00000512654 315 ntBASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 NEK4P2-201ENST00000580004 1012 ntBASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 AC024243.1-201ENST00000609234 778 ntBASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 AC005332.8-201ENST00000622750 2735 ntBASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 GNAS-203ENST00000306120 1878 ntBASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 LETM1P2-201ENST00000597330 2178 ntBASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 AC026471.1-201ENST00000564629 3026 ntBASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.73■□□□□ 0.59
CDKL3Q8IVW4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 LINC01568-207ENST00000641790 1380 ntBASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 AL596275.1-201ENST00000423464 877 ntBASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL3Q8IVW4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 PCDHB18P-201ENST00000524813 2368 ntBASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 AP000523.1-201ENST00000398242 1049 ntBASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 AC092865.7-201ENST00000641832 219 ntBASIC18.71■□□□□ 0.59
CDKL3Q8IVW4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms