Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CROCCP3Q8IVE0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 AGGF1P2-201ENST00000426656 2106 ntBASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 AC026691.1-201ENST00000602502 2017 ntBASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 AC142381.2-201ENST00000566120 298 ntBASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CROCCP3Q8IVE0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CROCCP3Q8IVE0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CROCCP3Q8IVE0 CROCCP2-202ENST00000412962 2773 ntBASIC16.52■□□□□ 0.23
CROCCP3Q8IVE0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CROCCP3Q8IVE0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CROCCP3Q8IVE0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CROCCP3Q8IVE0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CROCCP3Q8IVE0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CROCCP3Q8IVE0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CROCCP3Q8IVE0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 KRT18P11-201ENST00000435214 1283 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms