Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTTNQ86VV8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 AC069148.1-201ENST00000608741 768 ntBASIC16.09■□□□□ 0.17
RTTNQ86VV8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTTNQ86VV8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTTNQ86VV8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTTNQ86VV8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTTNQ86VV8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTTNQ86VV8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTTNQ86VV8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTTNQ86VV8 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.09■□□□□ 0.17
RTTNQ86VV8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 RNF152P1-201ENST00000397754 604 ntBASIC16.09■□□□□ 0.17
RTTNQ86VV8 AL359075.1-203ENST00000462729 1002 ntBASIC16.09■□□□□ 0.17
RTTNQ86VV8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTTNQ86VV8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.09■□□□□ 0.17
RTTNQ86VV8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTTNQ86VV8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTTNQ86VV8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
RTTNQ86VV8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
RTTNQ86VV8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTTNQ86VV8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RTTNQ86VV8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTTNQ86VV8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RTTNQ86VV8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.08■□□□□ 0.17
RTTNQ86VV8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.08■□□□□ 0.17
RTTNQ86VV8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RTTNQ86VV8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.08■□□□□ 0.16
RTTNQ86VV8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.08■□□□□ 0.16
RTTNQ86VV8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.08■□□□□ 0.16
RTTNQ86VV8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 PCED1CP-201ENST00000419887 785 ntBASIC16.08■□□□□ 0.16
RTTNQ86VV8 AC139887.4-201ENST00000607877 719 ntBASIC16.08■□□□□ 0.16
RTTNQ86VV8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.08■□□□□ 0.16
RTTNQ86VV8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.08■□□□□ 0.16
RTTNQ86VV8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.08■□□□□ 0.16
RTTNQ86VV8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.08■□□□□ 0.16
RTTNQ86VV8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RTTNQ86VV8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.07■□□□□ 0.16
RTTNQ86VV8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTTNQ86VV8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RTTNQ86VV8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms