Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 GMCL1P1-201ENST00000463439 1581 ntBASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HIST3H2AQ7L7L0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 AL355075.4-201ENST00000554988 638 ntBASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 MIR4674-201ENST00000582457 87 ntBASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 MIR4497-201ENST00000583208 89 ntBASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
HIST3H2AQ7L7L0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 NOC2LP1-202ENST00000452600 2235 ntBASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 AL163051.1-201ENST00000569214 1512 ntBASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 AC092338.2-201ENST00000568827 1415 ntBASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 HOXB1-202ENST00000577092 1414 ntBASIC16.62■□□□□ 0.25
HIST3H2AQ7L7L0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 AC007663.1-201ENST00000438948 1240 ntBASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 EGLN1P1-201ENST00000531623 762 ntBASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 WWOX-216ENST00000569818 525 ntBASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 CR769767.2-201ENST00000622735 460 ntBASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 AC010653.2-201ENST00000623505 997 ntBASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST3H2AQ7L7L0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms